Alkylating agents are a class of chemotherapeutics important for children with high-risk or relapsed leukemias. These are given during what we call conditioning regimens just before bone marrow transplantation (BMT). The goal of conditioning regimens is to eliminate all leukemia cells, before the bone marrow is replaced by BMT. However, the failure of these conditioning regimens to ablate all leukemia cells is a major problem that leads to relapse after BMT. Leukemic relapse is the most common cause of treatment failure of BMT regimens, and these patients have a very poor prognosis.